Table 4

Regions of LOH with normal copy number in CLL patients

Patient no.ArrayLOHlog10PKnown gains or losses, including literature citationsThis seriesSNPPhysical locationSize, Mb
Gains, no.Losses, no.Other, no. (type)StartEndStartEnd
810kV21p35.1-p36.139517,1815169791511025183057943395567715.65
5810k_1311q21.3-q23.3813117Loss, patient no. 41516848150976315014845716052260510.37
6250k1q23.3-24.1781191682016168493616181239917811784216.31
1250k2p11.2-p13451317050031707239741276328498029010.85
5810k_1312p14-p1618219Gain, patients no. 3, 5415077001510948487101346475868716.05
2110kV22q14.3-q22.39131191516036151420812471475914507271420.36
2410kV23p12.2-q13.3116117 (monosomy)Trisomy, patient no. 62151897415085418145650711534089133.88
4610kV23q21.2-q22.361191508269151044212765809913913929611.48
8350k3q24-26.21051191702895164802214484592016933524124.49
5810k_1314q25-q28.1111181507620150734710928915512614190416.85
6650k4q28.1-q31.1651181752885172410012635690114115585314.80
8350k5q21.1-q23.1109217,181659604165235810013286712100677920.87
8350k6q13-q14.14411716767361674617714312818290492711.47
4710kV26q23.2-q25.18517,18,201510064151384013339723814963561316.24
4610kV27p12.1-q11.225517,20 (trisomy)15195161517482522635176921402016.95
6650k8q12.1-q13.352117 (monosomy)16451541718475600762287430899814.23
5810k_13111p13-q1115121 (trisomy)15079261514572361634365600781019.84
6250k11p11.2-p15.14711917191211665098206573514679377726.14
8350k13q13.3-q14.381Recurrent deletion spanning MIRN genes17525011734152355745895044114114.87
2710kV213q14-qter56819,20Loss, patient no. 80151052015124634527992511404011668.76
8350k13q22.1-q32.374417,19,20172719216779647348358810019074926.71
2510kV213q31.1-q32.31315189421517348807224289992383219.20
6250k14q22.1-q24.285218,19Loss, patient no. 2517082701705411504411517012423119.68
8350k14q24.3-q32.1141318,1917148251732532782685588926031710.99
5250k18q21.1-22.29813218,1917308791714332442391896322609518.99
1710kV219p13.1-q13.11753 (trisomy); 117 (monosomy)15195331514072193805683774178318.36
  • — indicates no data.